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RabadanLab

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  1. arcasHLA arcasHLA Public

    Fast and accurate in silico inference of HLA genotypes from RNA-seq

    Python 114 49

  2. randomly randomly Public

    A Library for Denoising Single-Cell Data with Random Matrix Theory

    Jupyter Notebook 36 10

  3. Pegasus Pegasus Public

    Annotation and Prediction of Oncogenic Gene Fusions in RNAseq

    Java 11 8

  4. TOBI TOBI Public

    TOBI predicts somatic variants from .vcf or .bam input

    R 7 4

  5. scTDA scTDA Public

    Forked from CamaraLab/scTDA

    An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data

    Python 7 8

  6. ph_datasets ph_datasets Public

    Persistent Homology Datasets

    6 3

Repositories

7 results for all repositories written in R sorted by last updated
Showing 7 of 7 repositories
  • RabadanLab/spatial_dipg’s past year of commit activity
    R 0 1 1 0 Updated Apr 21, 2023
  • PH_recombination_virus Public

    Pipeline to infer recombination rates

    RabadanLab/PH_recombination_virus’s past year of commit activity
    R 0 0 0 0 Updated Mar 24, 2021
  • Bootstrap-Analysis-Arriaga-Nature-Cancer-2020 Public

    Script of bootstrap analysis of evolution tree used in Juan M Arriaga, et al. A MYC and RAS co-activation signature in localized prostate cancer drives bone metastasis and castration resistance. Nature Cancer (2020)

    RabadanLab/Bootstrap-Analysis-Arriaga-Nature-Cancer-2020’s past year of commit activity
    R 2 0 0 0 Updated Aug 13, 2020
  • TOBI Public

    TOBI predicts somatic variants from .vcf or .bam input

    RabadanLab/TOBI’s past year of commit activity
    R 7 MIT 4 4 0 Updated May 29, 2019
  • RabadanLab/mutcomfocal’s past year of commit activity
    R 0 MIT 0 0 0 Updated May 29, 2019
  • mage-pipeline Public

    MAGE - Multilevel Analysis of Gene Expression

    RabadanLab/mage-pipeline’s past year of commit activity
    R 1 MIT 0 0 0 Updated Jan 6, 2018
  • TOBI_fork Public Forked from alireza202/TOBI

    Tumor Only Boosting Identification of driver mutations.

    RabadanLab/TOBI_fork’s past year of commit activity
    R 0 3 0 0 Updated Jan 9, 2015

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