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Updated ESS check function name in iPython notebook
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xiaoruiDong committed Jun 4, 2019
1 parent 8ee282b commit 55ad23a
Showing 1 changed file with 44 additions and 29 deletions.
73 changes: 44 additions & 29 deletions ipython/ARC ESS diagnostics.ipynb
Original file line number Diff line number Diff line change
Expand Up @@ -16,61 +16,76 @@
"name": "stdout",
"output_type": "stream",
"text": [
"ARC execution initiated on Mon Dec 24 11:35:41 2018\n",
"ARC execution initiated on Tue Jun 4 10:43:03 2019\n",
"\n",
"###############################################################\n",
"# #\n",
"# Automatic Rate Calculator #\n",
"# ARC #\n",
"# #\n",
"# Version: 0.1 #\n",
"# Version: 1.0.0 #\n",
"# #\n",
"###############################################################\n",
"\n",
"The current git HEAD for ARC is:\n",
" 7e3cc3b3be02b926d33d3fd066ee9c1d60f12b2f\n",
" Mon Jun 3 17:17:32 2019 -0400\n",
"\n",
"Starting project Diagnostics\n",
"Using default level b3lyp/6-31+g(d,p) for refined conformer searches (after filtering via force fields)\n",
"Using default level b3lyp/6-31+g(d,p) for TS guesses comparison of different methods\n",
"Using default level wb97xd/6-311++g(d,p) for geometry optimizations\n",
"Using default level wb97xd/6-311++g(d,p) for frequency calculations\n",
"Using default level ccsd(t)-f12/cc-pvtz-f12 for single point calculations\n",
"Using default level wb97xd/6-311++g(d,p) for rotor scans\n",
"\n",
"Using the following ESS settings:\n",
"{'gaussian': ['pharos']}\n",
"\n",
"Using ccsd(t)-f12/cc-pvtz-f12 as model chemistry for energy corrections in Arkane\n",
"\n",
"Executing QM jobs remotely. Mapping servers...\n",
"Using Gaussian on pharos\n",
"Using QChem on pharos\n",
"Using Molpro on pharos\n",
"\n",
"\n",
"Using default level b97-d3/6-311+g(d,p) for refined conformer searches (after filtering via force fields)\n",
"Using default level wb97x-d3/6-311+g(d,p) for geometry optimizations\n",
"Using default level wb97x-d3/6-311+g(d,p) for frequency calculations\n",
"Using default level ccsd(t)-f12/cc-pvtz-f12 for single point calculations\n",
"Using ccsd(t)-f12/cc-pvtz-f12 as model chemistry for energy corrections in Arkane\n",
"Using default level b3lyp/6-311+g(d,p) for rotor scans\n",
" ***** Running ESS diagnostics: *****\n",
"\n",
"Found the following ESS on the local machine:\n",
"[u'orca']\n",
"\n",
"\n",
" ***** Runnigng ESS diagnostics: *****\n",
"ARC is being excecuted on a PC (did not find \"SSH_CONNECTION\" in the os.environ dictionary\n",
"\n",
"\n",
"Executing QM jobs remotely. Mapping servers...\n",
"Mapping servers...\n",
"\n",
"\n",
"Trying pharos\n",
"Found Gaussian on pharos: g03=[u'/opt/g03/g03\\n'], g09=[u'/usr/local/EStokTP/exe/g09\\n'], g16=[]\n",
"Found QChem on pharos\n",
"Found Molpro on pharos\n",
" Found Gaussian on pharos: g03=[], g09=[], g16=[u'/opt/g16/g16\\n']\n",
" Did NOT find QChem on pharos\n",
" Did NOT find Orca on pharos\n",
" Did NOT find Molpro on pharos\n",
"\n",
"Trying rmg\n",
"Did NOT find Gaussian on rmg: g03=[], g09=[], g16=[]\n",
"Did NOT find QChem on rmg\n",
"Did NOT find Molpro on rmg\n",
"Using Gaussian on pharos\n",
"Using QChem on pharos\n",
"Using Molpro on pharos\n",
" Found Gaussian on rmg: g03=[], g09=[], g16=[u'/opt/g16/g16\\n']\n",
" Did NOT find QChem on rmg\n",
" Found Orca on rmg\n",
" Did NOT find Molpro on rmg\n",
"\n",
"\n",
"\n",
"Using Gaussian on ['pharos', 'rmg']\n",
"Using QChem on []\n",
"Using Orca on [u'local', 'rmg']\n",
"Using Molpro on []\n",
"\n",
"\n",
"ESS diagnostics completed\n"
"ESS diagnostics completed (elapsed time: 00:00:13)\n"
]
}
],
"source": [
"import arc\n",
"\n",
"arc0 = arc.ARC(project='Diagnostics')\n",
"arc0.determine_remote(diagnostics=True)"
"arc0.determine_ess_settings(diagnostics=True)"
]
},
{
Expand All @@ -83,9 +98,9 @@
],
"metadata": {
"kernelspec": {
"display_name": "rmg_env",
"display_name": "Python 2",
"language": "python",
"name": "rmg_env"
"name": "python2"
},
"language_info": {
"codemirror_mode": {
Expand All @@ -97,7 +112,7 @@
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython2",
"version": "2.7.15"
"version": "2.7.16"
}
},
"nbformat": 4,
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