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Simulation of two linked QTL in a single chromosome with varying number of markers, QTL location and effect sizes

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RodrigoGM/LinkedQTL

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LinkedQTL

Simulation of two linked QTL in a single chromosome with varying number of markers, QTL location and effect sizes.

  • data/

    Directory contain main simulation data i.e. starting parameters. These are , the congenic marker maps, QTL effects and distances, and the random number generator's seed.

  • src/

    Source scripts

  • cf2_d/ cf2_e/ cf2_o/ cf2_p/

    Directores specific to the data generated by the simulation. The letter following the underscore stands for :

    • d = data (unprocessed cross data)
    • e = examples (fully saved subset of crosses and analysis)
    • o = outputs (output QTL summary files)
    • p = processed data (after succesfull analysis, files in cf2_d are moved to cf2_p)

LICENSE : Essentially BSD-3

README.md : this file

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Simulation of two linked QTL in a single chromosome with varying number of markers, QTL location and effect sizes

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