Skip to content
Permalink
master
Switch branches/tags

Name already in use

A tag already exists with the provided branch name. Many Git commands accept both tag and branch names, so creating this branch may cause unexpected behavior. Are you sure you want to create this branch?
Go to file
 
 
Cannot retrieve contributors at this time
# https://travis-ci.org/tgbugs/pyontutils
language: python
cache:
directories:
- $HOME/.cache/pip
- $HOME/.m2
- ${TRAVIS_BUILD_DIR}/../SciGraph
branches:
only:
- dev
- master
git:
depth: 10
python:
- 3.9
env:
global:
- ONTOLOGY=$(git show --first-parent --name-only --pretty='' HEAD | grep '\.ttl$')
- DOCS=$(git show --first-parent --name-only --pretty='' HEAD | grep '^docs\/')
- TRAVIS=$(git show --first-parent --name-only --pretty='' HEAD | grep '^\.travis.yml$')
matrix:
- ONT_CONFIG=nifstd
- ONT_CONFIG=sparc
before_install:
- if [[ -n $DOCS && $TRAVIS_BRANCH = master ]];then echo trigger docs build; fi
- git checkout ${TRAVIS_BRANCH} # ontload doesn't currently work if git is in detached head mode
- mkdir build
- pushd build
- wget https://raw.githubusercontent.com/tgbugs/pyontutils/master/nifstd/scigraph/graphload-base-template.yaml
- >
case ${ONT_CONFIG} in
nifstd) curl -o ontologies.yaml https://raw.githubusercontent.com/tgbugs/pyontutils/master/nifstd/scigraph/ontologies-nifstd.yaml ;;
sparc) curl -o ontologies.yaml https://raw.githubusercontent.com/SciCrunch/sparc-curation/master/resources/scigraph/ontologies-sparc.yaml ;;
esac
- popd
install:
- pip install git+https://github.com/tgbugs/pyontutils.git
- >
ontload scigraph
--scigraph-quiet
--scigraph-org SciGraph
--scigraph-branch master
--zip-location "${TRAVIS_BUILD_DIR}/build"
--git-local $(realpath "${TRAVIS_BUILD_DIR}/../")
script:
- >
ontload graph NIF-Ontology NIF
--scigraph-quiet
--path-build-scigraph $(realpath "${TRAVIS_BUILD_DIR}/../")
--scigraph-org SciGraph
--scigraph-branch master
--zip-location "${TRAVIS_BUILD_DIR}/build"
--git-local $(realpath "${TRAVIS_BUILD_DIR}/../")
--branch ${TRAVIS_BRANCH}
--graphload-config "${TRAVIS_BUILD_DIR}/build/graphload-base-template.yaml"
--graphload-ontologies "${TRAVIS_BUILD_DIR}/build/ontologies.yaml"
- >
mv
"${TRAVIS_BUILD_DIR}/build/NIF-Ontology-${TRAVIS_BRANCH}-graph-*.zip"
"$(filename=$(basename $(realpath NIF-Ontology-dev-graph-*.zip)); echo "${filename%.*}-${ONT_CONFIG}.zip")"
after_success:
- echo ""
before_deploy:
- git config --local user.name "Travis Build Bot"
- git config --local user.email "tgbugs+build@gmail.com"
- export TRAVIS_TAG=${TRAVIS_TAG:-${TRAVIS_BRANCH}-${TRAVIS_BUILD_NUMBER}}
- if [[ -n $ONTOLOGY || -n $TRAVIS ]];then git tag $TRAVIS_TAG; fi
deploy:
provider: releases
api_key:
secure: "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"
file_glob: true
file: "${TRAVIS_BUILD_DIR}/build/NIF-Ontology-${TRAVIS_BRANCH}-graph-*.zip"
prerelease: true
draft: true
on:
all_branches: true
condition: -n $ONTOLOGY