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Slicer module to Download, Upload and Browse MRB datasets stored in a Midas database

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Slicer/Slicer-DataStore

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DataStore

Acknowledgments

The Slicer Data Store was hosted by Kitware using Midas Platform.

This work was supported by NIH Grant 3P41RR013218-12S1, NA-MIC, NAC, and the Slicer community.

Contributors

  • Jean-Christophe Fillion-Robin
  • Charles Marion
  • Jean-Baptiste Berger
  • Hina Shah
  • Pablo Hernandez-Cerdan
  • Steve Pieper

History

In 2013, this Slicer module called "Data Store" was created. It allowed to easily upload, download and browse MRB files stored in a remote database that was available at https://slicer.kitware.com/midas3/folder/1555. Source code of the module was stored in the Slicer/Slicer-DataStore GitHub project.

In March 2020, the Slicer community decided (see issue Slicer/Slicer#4602) to retire the DataStore module and instead store the corresponding data files as GitHub release assets into the Slicer/SlicerDataStore GitHub project.

In September 2021, the Slicer legacy extensions catalog has been updated (see issue Slicer/Slicer#5845) to include the /midas3/slicerdatastore and /midas3/slicerdatastore/user/login endpoints displaying instructions referencing the GitHub release assets. Additionally, the "Data Store" module was improved to set the legacy website theme based on the select Slicer style (Dark Slicer vs Light Slicer).

Light Slicer Dark Slicer
image image

Usage

How to install the Slicer Data Store:

  • Compile module using CMakeLists.txt
  • Open Slicer
  • Edit > Application Settings
  • Add an additional module path : path/to/build/lib/Slicer-4.2/qt-loadable-modules
  • Restart Slicer

The new module will appear in the all module list as DataStore

License

This project is distributed under the BSD-style Slicer license allowing academic and commercial use without any restrictions. Please see the License.txt file for details.