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Robust memory unit handling #20

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merged 3 commits into from
Apr 13, 2020

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@mbhall88 mbhall88 commented Apr 12, 2020

This PR addresses and closes #18

It adds a cookiecutter option that asks the user for their cluster's LSF_UNIT_FOR_LIMITS value. Internally, it also adds my "headerless" MemoryUnits module for dealing with memory units and converting between different metric scales. See #18 for further information.

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Very nice PR, code very clean and easy to understand. I have only one minor comment, which I won't even request the change, so it is up to you to do it or not before merge the PR!

{{cookiecutter.profile_name}}/lsf_submit.py Outdated Show resolved Hide resolved
@mbhall88 mbhall88 merged commit bd2cca6 into Snakemake-Profiles:development Apr 13, 2020
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2 participants