Scripts for the analysis of high-throughput sequencing data from the ARCAD project.
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README

arcad-hts - High-throughput sequencing for ARCAD project
========================================================

This directory contains arcad-hts, a package gathering scripts for the 
analysis of high-throughput sequencing data from the ARCAD project
(http://www.arcad-project.org/).

This package (copyright INRA-CIRAD) is free software, you can redistribute it 
and/or modify it under the terms of the GNU General Public License (GPLv3+).

The GNU General Public License does not permit this software to be
redistributed in proprietary programs.

This package is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

The code is hosted online: https://github.com/SouthGreenPlatform/arcad-hts


Installation
============

For the impatients:
	make
	make check
	make install
	
By default everything is installed in a directory bin/ in ${HOME}. 
If the bin/ directory does not exist, it will be created.
To install elsewhere, use the option INSTALL, for instance: 
	make install INSTALL="/usr/local/"


More information about arcad-hts
================================

TODO

Please report issues on GitHub: https://github.com/SouthGreenPlatform/arcad-hts/issues