South Green Bioinformatics platform
- 18 followers
- Montpellier
- http://www.southgreen.fr/
- @green_bioinfo
Pinned
Repositories
- AgroLD_webapp Public
AgroLD is a RDF knowledge base that consists of data integrated from a variety of plant resources and ontologies. The aim of the Agronomic Linked Data (AgroLD) project is to provide a portal for bioinformatics and domain experts to exploit the homogenized data models towards efficiently generating research hypotheses.
- Myrtaceae-RNASeq-scripts Public
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- PanExplorer_workflow Public
Snakemake worklow for bacterial pan-genome analysis. It can be run in the back-end of PanExplorer web application
- VcfHunter Public
VcfExplorer regroups several programs which principal aims are to map DNA and RNAseq data onto reference genome sequence, perform variant calling, manipulate vcf files, perform chromosome painting of accessions based on the contribution of ancestral groups, select marker for genetic map analysis and perform pairwise chromosome linkage of ordered…
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