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add mountainsort5 and bump mountainsort4 #60

add mountainsort5 and bump mountainsort4

add mountainsort5 and bump mountainsort4 #60

name: Test sorter images in singularity
on:
workflow_dispatch:
pull_request:
branches: [main]
types: [synchronize, opened, reopened, ready_for_review]
jobs:
test-images:
name: Test on (${{ matrix.os }})
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
# "macos-latest", "windows-latest"
os: ["ubuntu-latest", ]
steps:
- uses: actions/checkout@v3
with:
python-version: "3.9"
- uses: eWaterCycle/setup-singularity@v7
with:
singularity-version: 3.8.3
- name: Python version
run: |
python --version
- name: Install dependencies
run: |
pip install tridesclous
pip install -r requirements_test.txt
- name: Run test singularity containers
run: |
pip install tridesclous
pytest -sv tests/test_singularity_containers.py