autotools: update applications/ and libraries/ so that all the subcom…

…ponents can be bootstrapped after being git cleaned. The issue is that without an auxdir autoconf looks for the install-sh script in . ../ and ../../ which usually succeeds in ../, sadly that directory will never contain ltmain.sh for instance, so we need to make sure that all links to install-sh etc. are local to the sub-component.
Starlink · Feb 26, 2014 · 38db40a · 38db40a
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commit 38db40a
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diff --git a/applications/astrom/configure.ac b/applications/astrom/configure.ac
@@ -2,6 +2,7 @@ dnl    Process this file with autoconf to produce a configure script
 AC_REVISION($Revision$)
 
 AC_INIT([astrom],[3.8],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 AC_PREREQ([2.69])
 AM_INIT_AUTOMAKE(1.8.2-starlink)

diff --git a/applications/atools/configure.ac b/applications/atools/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT(atools, 1.9-14, starlink@jiscmail.ac.uk)
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ(2.50)

diff --git a/applications/ccdpack/configure.ac b/applications/ccdpack/configure.ac
@@ -1,4 +1,5 @@
 AC_INIT([ccdpack],[4.1-1],[ccdpack@starlink.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 AC_PREREQ([2.69])
 AM_INIT_AUTOMAKE(1.8.2-starlink)
 AC_CONFIG_SRCDIR(ccdexercise)

diff --git a/applications/coco/configure.ac b/applications/coco/configure.ac
@@ -3,7 +3,8 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([coco],[2.2-8],[starlink@jiscmail.ac.uk])
-
+AC_CONFIG_AUX_DIR([build-aux])
+
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])
 AM_INIT_AUTOMAKE(1.8.2-starlink)

diff --git a/applications/convert/configure.ac b/applications/convert/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([convert],[1.7-1],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/convert/idl/configure.ac b/applications/convert/idl/configure.ac
@@ -5,6 +5,7 @@ dnl    Initialisation: package name and version number
 dnl    Note we use the name "convert" not convert-idl, this is a slight of
 dnl    hand to use the same per-package-dirs as convert.
 AC_INIT([convert],[1.5-4],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/cupid/configure.ac b/applications/cupid/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([cupid],[2.0],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 PACKAGE_UPCASE='CUPID'
 AC_DEFINE( [PACKAGE_UPCASE], "CUPID", [Upper cased package name] )
 AC_SUBST(PACKAGE_UPCASE)

diff --git a/applications/cursa/configure.ac b/applications/cursa/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([cursa],[6.5],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/daophot/configure.ac b/applications/daophot/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([daophot],[1.3-6],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/datacube/configure.ac b/applications/datacube/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([datacube],[1.3],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/dipso/configure.ac b/applications/dipso/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number.
 AC_INIT([dipso],[3.6-5],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/docfind/configure.ac b/applications/docfind/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT(docfind, 1.3-2, starlink@jiscmail.ac.uk)
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ(2.50)

diff --git a/applications/echomop/configure.ac b/applications/echomop/configure.ac
@@ -2,6 +2,7 @@ dnl    Process this file with autoconf to produce a configure script
 AC_REVISION($Revision$)
 
 AC_INIT([echomop],[3.3-7],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 AC_PREREQ([2.69])
 AM_INIT_AUTOMAKE(1.8.2-starlink)

diff --git a/applications/echwind/configure.ac b/applications/echwind/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([echwind],[3.1-4],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/esp/configure.ac b/applications/esp/configure.ac
@@ -2,6 +2,7 @@ dnl    Process this file with autoconf to produce a configure script
 AC_REVISION($Revision$)
 
 AC_INIT([esp],[0.11-4],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 AC_PREREQ([2.69])
 AM_INIT_AUTOMAKE(1.8.2-starlink)
@@ -15,6 +16,8 @@ AC_PROG_FC
 dnl AC_PROG_LIBTOOL
 STAR_MONOLITHS
 
+LT_INIT
+
 dnl    Other options here, such as
 STAR_CNF_COMPATIBLE_SYMBOLS
 STAR_CHECK_PROGS( hlib )

diff --git a/applications/extractor/configure.ac b/applications/extractor/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([extractor],[2.5-1],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/extreme/configure.ac b/applications/extreme/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT(extreme, 0.1-1, starlink@jiscmail.ac.uk)
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ(2.50)

diff --git a/applications/figaro/Makefile.am b/applications/figaro/Makefile.am
@@ -1,5 +1,7 @@
 ## Process this file with automake to produce Makefile.in
 
+ACLOCAL_AMFLAGS = -I build-aux
+
 bin_SCRIPTS = figaro.csh figaro.icl figaro.sh
 
 dist_bin_SCRIPTS = specdre.csh specdre.icl twodspec.csh twodspec.icl \

diff --git a/applications/figaro/configure.ac b/applications/figaro/configure.ac
@@ -3,7 +3,8 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([figaro],[5.6-6],[starlink@jiscmail.ac.uk])
-
+AC_CONFIG_AUX_DIR([build-aux])
+
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])
 

diff --git a/applications/findcoords/configure.ac b/applications/findcoords/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT(findcoords, 1.0-2, starlink@jiscmail.ac.uk)
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ(2.50)

diff --git a/applications/fluxes/configure.ac b/applications/fluxes/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([fluxes],[1.4-1],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/gaia/configure.ac b/applications/gaia/configure.ac
@@ -8,12 +8,12 @@ dnl    scripts have been updated (this normally requires a bootstrap,
 dnl    configure, bootstrap, the configure updates the local directories 
 dnl    which then require regenerating again).
 AC_INIT([gaia],[4.4-5],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])
 dnl    Require Starlink automake
 AM_INIT_AUTOMAKE([1.8.2-starlink])
-AC_CONFIG_MACRO_DIR([m4])
 
 dnl    Sanity-check: name a file in the source directory -- if this
 dnl    isn't found then configure will complain

diff --git a/applications/generic/configure.ac b/applications/generic/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT(generic, 1.3, starlink@jiscmail.ac.uk)
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ(2.50)

diff --git a/applications/hdstools/configure.ac b/applications/hdstools/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT(hdstools, 1.0-2, starlink@jiscmail.ac.uk)
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ(2.50)

diff --git a/applications/hdstrace/configure.ac b/applications/hdstrace/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([hdstrace],[1.2-3],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/htx/configure.ac b/applications/htx/configure.ac
@@ -2,6 +2,7 @@ dnl    Process this file with autoconf to produce a configure script
 AC_REVISION($Revision$)
 
 AC_INIT(htx, 1.3-2, starlink@jiscmail.ac.uk)
+AC_CONFIG_AUX_DIR([build-aux])
 AC_PREREQ(2.50)
 AM_INIT_AUTOMAKE(1.8.2-starlink)
 AC_CONFIG_SRCDIR([showme])

diff --git a/applications/icl/configure.ac b/applications/icl/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([icl],[3.1-11],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/ifd/configure.ac b/applications/ifd/configure.ac
@@ -2,6 +2,7 @@ dnl    Process this file with autoconf to produce a configure script
 AC_REVISION($Revision$)
 
 AC_INIT(ifd, 1.2-8, starlink@jiscmail.ac.uk)
+AC_CONFIG_AUX_DIR([build-aux])
 AC_PREREQ(2.50)
 AM_INIT_AUTOMAKE(1.8.2-starlink)
 AC_CONFIG_SRCDIR([ifd2star.in])

diff --git a/applications/kappa/configure.ac b/applications/kappa/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT(kappa, 2.1-9, starlink@jiscmail.ac.uk)
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/kaprh/configure.ac b/applications/kaprh/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([kaprh],[2.0],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/messgen/configure.ac b/applications/messgen/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl   Initialisation: package name and version number
 AC_INIT([messgen],[1.2],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl   Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/news/configure.ac b/applications/news/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT(news, 2.1-2, starlink@jiscmail.ac.uk)
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ(2.50)

diff --git a/applications/observe/configure.ac b/applications/observe/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([observe],[2.3-2],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/pamela/configure.ac b/applications/pamela/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([pamela],[1.0.6],[t.r.marsh@warwick.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/period/configure.ac b/applications/period/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([period],[5.0-4],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/photom/configure.ac b/applications/photom/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([photom],[1.12-2],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/pisa/configure.ac b/applications/pisa/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([pisa],[2.4-8],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/polpack/configure.ac b/applications/polpack/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([polpack],[3.2-0],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/pongo/configure.ac b/applications/pongo/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([pongo],[2.0-3],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/psmerge/configure.ac b/applications/psmerge/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([psmerge],[1.0-7],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/rv/configure.ac b/applications/rv/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([rv],[2.4-5],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/sgmlkit/configure.ac b/applications/sgmlkit/configure.ac
@@ -1,6 +1,7 @@
 dnl    Process this file with autoconf to produce a configure script
 
 AC_INIT(sgmlkit, 0.7-13, starlink@jiscmail.ac.uk)
+AC_CONFIG_AUX_DIR([build-aux])
 
 AC_PREREQ(2.50)
 AM_INIT_AUTOMAKE(1.8.2-starlink)

diff --git a/applications/smurf/configure.ac b/applications/smurf/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([smurf],[1.5.0],[scuba2dr@phas.ubc.ca])
+AC_CONFIG_AUX_DIR([build-aux])
 PACKAGE_UPCASE='SMURF'
 AC_DEFINE( [PACKAGE_UPCASE], "SMURF", [Upper cased package name] )
 AC_SUBST(PACKAGE_UPCASE)

diff --git a/applications/specx/configure.ac b/applications/specx/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([specx],[6.8-5],[t.jenness@jach.hawaii.edu])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/spt/configure.ac b/applications/spt/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([spt],[1.3-1],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/sst/configure.ac b/applications/sst/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT([sst],[1.1-2],[starlink@jiscmail.ac.uk])
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ([2.69])

diff --git a/applications/star2html/configure.ac b/applications/star2html/configure.ac
@@ -3,6 +3,7 @@ AC_REVISION($Revision$)
 
 dnl    Initialisation: package name and version number
 AC_INIT(star2html, 1.7-1, starlink@jiscmail.ac.uk)
+AC_CONFIG_AUX_DIR([build-aux])
 
 dnl    Require autoconf-2.50 at least
 AC_PREREQ(2.50)