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StatisticalPopulationGenomics

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  1. MSMCandMSMC2 MSMCandMSMC2 Public

    Shell 6 5

  2. polyDFE polyDFE Public

    estimate the DFE and α from SFS data

    R 4 2

  3. plink plink Public

    Data management and summary statistics with PLINK

    3 1

  4. MafFilter MafFilter Public

    Chapter 2: multiple genomes analysis with MafFilter

    R 1

  5. msprime msprime Public

    Coalescent simulations with msprime

    Jupyter Notebook 1 2

  6. CoalHMM CoalHMM Public

    Chapter 9: CoalHMM

    Python

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Showing 8 of 8 repositories
  • plink Public

    Data management and summary statistics with PLINK

    StatisticalPopulationGenomics/plink’s past year of commit activity
    3 1 0 0 Updated Mar 25, 2021
  • CoalHMM Public

    Chapter 9: CoalHMM

    StatisticalPopulationGenomics/CoalHMM’s past year of commit activity
    Python 0 0 0 0 Updated Mar 25, 2021
  • msprime Public

    Coalescent simulations with msprime

    StatisticalPopulationGenomics/msprime’s past year of commit activity
    Jupyter Notebook 1 2 0 0 Updated Mar 25, 2021
  • polyDFE Public

    estimate the DFE and α from SFS data

    StatisticalPopulationGenomics/polyDFE’s past year of commit activity
    R 4 2 0 0 Updated Mar 25, 2021
  • MSMCandMSMC2 Public
    StatisticalPopulationGenomics/MSMCandMSMC2’s past year of commit activity
    Shell 6 5 0 0 Updated Mar 25, 2021
  • ARGweaver Public
    StatisticalPopulationGenomics/ARGweaver’s past year of commit activity
    Shell 0 0 0 0 Updated Mar 25, 2021
  • PopStructProtocolsChapter Public
    StatisticalPopulationGenomics/PopStructProtocolsChapter’s past year of commit activity
    HiveQL 0 2 0 0 Updated Mar 25, 2021
  • MafFilter Public

    Chapter 2: multiple genomes analysis with MafFilter

    StatisticalPopulationGenomics/MafFilter’s past year of commit activity
    R 1 GPL-3.0 0 0 0 Updated Mar 25, 2021

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