StatisticalPopulationGenomics / plink Public

Data management and summary statistics with PLINK

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Name		Name	Last commit message	Last commit date
Latest commit History 5 Commits
1kg_sex.txt		1kg_sex.txt
README.md		README.md
chr21_phase1_subset.vcf.gz		chr21_phase1_subset.vcf.gz
step10_pca.eigenval		step10_pca.eigenval
step10_pca.eigenvec		step10_pca.eigenvec
step10_pca.log		step10_pca.log
step11_r2_report.log		step11_r2_report.log
step12_export.log		step12_export.log
step1_converted_data.log		step1_converted_data.log
step2a_snps_only.log		step2a_snps_only.log
step2b_idfill.log		step2b_idfill.log
step3_add_sex.log		step3_add_sex.log
step4_missing_filter.log		step4_missing_filter.log
step4_relprune.log		step4_relprune.log
step5_relprune.king.cutoff.in.id		step5_relprune.king.cutoff.in.id
step5_relprune.king.cutoff.out.id		step5_relprune.king.cutoff.out.id
step5_relprune.log		step5_relprune.log
step6a_allele_freqs.log		step6a_allele_freqs.log
step6b_freq_spectrum.afreq.alt1.bins		step6b_freq_spectrum.afreq.alt1.bins
step6b_freq_spectrum.log		step6b_freq_spectrum.log
step7_maf_filter.log		step7_maf_filter.log
step8_hwe_filter.log		step8_hwe_filter.log
step9a_ldprune.log		step9a_ldprune.log
step9a_ldprune.prune.in		step9a_ldprune.prune.in
step9a_ldprune.prune.out		step9a_ldprune.prune.out
step9b_ldprune.log		step9b_ldprune.log