Fix: Removed ENSG00000268104 from the following reaction GPRs: MAR053…

[jreimertz]

Fix: Removed ENSG00000268104 from the following reaction GPRs: MAR05305, MAR05308, MAR05311, MAR05314, MAR05315, MAR05316, MAR05317, MAR05318, MAR05319, MAR05320, MAR05324, MAR05326, MAR05333, MAR06375, MAR06377, MAR06380, MAR06381, MAR06382, MAR06384, MAR08629, MAR08917, MAR11791 as referenced in Issue #567

Main improvements in this PR:

I removed ENSG00000268104 from the GPRs of 22 reactions (MAR05305, MAR05308, MAR05311, MAR05314, MAR05315, MAR05316, MAR05317, MAR05318, MAR05319, MAR05320, MAR05324, MAR05326, MAR05333, MAR06375, MAR06377, MAR06380, MAR06381, MAR06382, MAR06384, MAR08629, MAR08917, MAR11791) since these reactions do not include Cl- and ENSG00000268104 mediates transport of neutral and cationic amino acids in a Na+/Cl- dependent manner. Each of these reactions do not include Cl-.

I hereby confirm that I have:

• Tested my code on my own computer for running the model
• Selected develop as a target branch
• Any removed reactions and metabolites have been moved to the corresponding deprecated identifier lists

I did not see a dedicated file for removed GPRs so I did not include the above changes, if I missed it please let me know and I'll update it accordingly.

[haowang-bioinfo]

@jreimertz good job!

[haowang-bioinfo]

I did not see a dedicated file for removed GPRs so I did not include the above changes, if I missed it please let me know and I'll update it accordingly.

Everything is alright.

Note that curations to Human-GEM can be intuitively and conveniently made directly to the plain-txt model file Human-GEM.yml, exactly as you did here, since v1.3.1 (#156)