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@SysBioInra

SysBioINRAe

Systems Biology team of the lab MaIAGE at Inrae, France

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  1. RBApy RBApy Public

    Python package for creating, calibrating and simulating RBA models

    Python 11 10

  2. Bacterial-RBA-models Bacterial-RBA-models Public

    RBA models created by RBApy

    Python 4 4

  3. rbatools rbatools Public

    Programming interface to resource allocation modelling with the Resource Balance Analysis (RBA) method. This is version 1.0.3

    Python 2 2

  4. bipsim bipsim Public

    Gillespie-based simulator of biochemical processes

    C++ 1

  5. SysOnto SysOnto Public

    Systemic ontologies

  6. Reconstruction-of-censored-trajectories Reconstruction-of-censored-trajectories Public

    We consider particles trajectories following birth and death processes as well as Browian motion with drift. These trajectories are observed on a subregion of the region where they lye. We aim to r…

    1

Repositories

Showing 6 of 6 repositories
  • rbatools Public

    Programming interface to resource allocation modelling with the Resource Balance Analysis (RBA) method. This is version 1.0.3

    SysBioInra/rbatools’s past year of commit activity
    Python 2 GPL-3.0 2 0 0 Updated Jun 7, 2023
  • RBApy Public

    Python package for creating, calibrating and simulating RBA models

    SysBioInra/RBApy’s past year of commit activity
    Python 11 GPL-3.0 10 11 0 Updated Jun 5, 2023
  • Bacterial-RBA-models Public

    RBA models created by RBApy

    SysBioInra/Bacterial-RBA-models’s past year of commit activity
    Python 4 4 0 0 Updated Mar 7, 2023
  • bipsim Public

    Gillespie-based simulator of biochemical processes

    SysBioInra/bipsim’s past year of commit activity
    C++ 1 GPL-3.0 0 0 0 Updated Apr 18, 2021
  • Reconstruction-of-censored-trajectories Public

    We consider particles trajectories following birth and death processes as well as Browian motion with drift. These trajectories are observed on a subregion of the region where they lye. We aim to recognize if some of tracklets observed could connected through the unobserved region.

    SysBioInra/Reconstruction-of-censored-trajectories’s past year of commit activity
    0 1 0 0 Updated Jul 8, 2020
  • SysOnto Public

    Systemic ontologies

    SysBioInra/SysOnto’s past year of commit activity
    0 0 0 0 Updated Jun 26, 2020

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