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Bacterial RBA models

This repository stores the RBA models of:

  • Bacillus subtilis 168 WT strain
  • Escherichia coli K12 WT strain
  • Escherichia coli strain fixing CO2
  • Ralstonia eutropha H16 (also known as Cupriavidus necator)
  • Vibrio natriegens

All models have been created using RBApy (https://doi.org/10.1016/j.ymben.2019.06.001).

Models of B. subtilis and E. coli were developed by INRAE, please cite (https://doi.org/10.1016/j.ymben.2019.06.001) when using these models.

The model of Ralstonia eutropha was developed by M. Jahn (https://github.com/m-jahn). Please cite (https://doi.org/10.7554/eLife.69019) when using this model.

The model of Vibrio natriegens was developed by L. Coppens (https://github.com/LucasCoppens/). Please cite (https://doi.org/10.15252/msb.202110523) when using this model.