CMBD Workshop

Install homebrew

Download

/usr/bin/ruby -e "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/master/install)"

Update PATH to search directories where homebrew installs packages

echo 'export PATH="/usr/local/bin:$PATH"' >> ~/.bash_profile

Make sure it is working

brew doctor

Try to download a software package

brew install wget

Find out more here

You can install Python with homebrew (also installs pip)

brew install python

Download Python packages

pip install pandas

pip install jupyter

pip install matplotlib

pip install numpy

pip install seaborn

pip install sklearn

pip install palettable

pip install colormap

Cheat Sheets!

Pandas

git

bash

regular expressions

A regular expressions tool