Transposable elements of Aedes albopictus

Managing the conda environment

To install the conda env:

conda env create -f TE_Aalb.yml

To activate it:

conda activate TE_Aalb

Create a new .yml file:

conda env export --from-history > TE_Aalb.yml

To update it:

conda env update --file TE_Aalb.yml --prune

Add the conda env to the jupyter notebook kernels:

python -m ipykernel install --user --name=TE_Aalb

Organization of the repository

• misc/: old scripts and other stuff;
• notebooks/: jupyter notebooks and related scripts;
• scripts/: scripts used to produce results.