Add cystoscope, endoscope and prostate specific antigen test to consu…

…mable list - add three consumables to `ResourceFile_Consumables_Items_and_Packages.csv` using the `generate_consumables_item_codes_and_packages.py` script - correct the spelling of cystoscope (from cytoscope)
UCL · Mar 5, 2024 · ff4d072 · ff4d072
1 parent 3b1f8e5
commit ff4d072
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Showing 3 changed files with 39 additions and 4 deletions.
diff --git a/resources/healthsystem/consumables/ResourceFile_Consumables_Items_and_Packages.csv b/resources/healthsystem/consumables/ResourceFile_Consumables_Items_and_Packages.csv
diff --git a/resources/healthsystem/consumables/ResourceFile_consumables_matched.csv b/resources/healthsystem/consumables/ResourceFile_consumables_matched.csv
diff --git a/...nsumables/processing_data_from_one_health/generate_consumables_item_codes_and_packages.py b/...nsumables/processing_data_from_one_health/generate_consumables_item_codes_and_packages.py
@@ -20,7 +20,8 @@
 
 # Set local Dropbox source
 path_to_dropbox = Path(  # <-- point to the TLO dropbox locally
-    '/Users/tbh03/Dropbox (SPH Imperial College)/Thanzi la Onse Theme 1 SHARE')
+    #'/Users/tbh03/Dropbox (SPH Imperial College)/Thanzi la Onse Theme 1 SHARE'
+    '/Users/sm2511/Dropbox/Thanzi la Onse')
 
 resourcefilepath = Path("./resources")
 path_for_new_resourcefiles = resourcefilepath / "healthsystem/consumables"
@@ -308,6 +309,40 @@
     ignore_index=True
 )
 
+
+cons = cons.append({
+    'Intervention_Cat': "Added by SM (Recommended by EJ)",
+    'Intervention_Pkg': "Misc",
+    'Intervention_Pkg_Code': -99,
+    'Items': "Cystoscope",
+    'Item_Code': 285,
+    'Expected_Units_Per_Case': 1.0,
+    'Unit_Cost': np.nan},
+    ignore_index=True
+)
+
+cons = cons.append({
+    'Intervention_Cat': "Added by SM (Recommended by EJ)",
+    'Intervention_Pkg': "Misc",
+    'Intervention_Pkg_Code': -99,
+    'Items': "Endoscope",
+    'Item_Code': 280,
+    'Expected_Units_Per_Case': 1.0,
+    'Unit_Cost': np.nan},
+    ignore_index=True
+)
+
+cons = cons.append({
+    'Intervention_Cat': "Added by SM (Recommended by EJ)",
+    'Intervention_Pkg': "Misc",
+    'Intervention_Pkg_Code': -99,
+    'Items': "Prostate specific antigen test",
+    'Item_Code': 281,
+    'Expected_Units_Per_Case': 1.0,
+    'Unit_Cost': np.nan},
+    ignore_index=True
+)
+
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