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Hands-on workshop for Snakemake and Nextflow
The shiny app that accompanies the ngsReports R package
The practical material from the course Biotech 7005: Bioinformatics and Systems Modelling
Scripts and Snakemake pipeline used in the EMBL-ABR webinar
Joint Snakemake and Nextflow workshop following the EMBL-ABR hybrid mode of delivery
A collection of various sysadmin-related scripts which others might find useful.
Sequence databases for use with Quick RNA-Seq QC
Scripts for performing a quick RNA-Seq QC
UofA Bioinformatics Hub Virtual Machine setup
General purpose conversion scripts for a variety of purposes
Introduction to BASH
A small template to ease setting up new Snakemake workflows capable of submitting jobs to a Slurm cluster such as phoenix.
Analysis of GBS dataset obtained from the Rabbit population at Gum Creek in both 2012 and 1996.
Assembly of the Venom Gland Transcriptome from Tiger Snake
Blog for University of Adelaide's Bioinformatics Hub
Bioinformatics Hub RNAseq snakemake pipeline
UofABioinformaticsHub is a meta repository for the UofA Bioinformatics Hub
Introduction to NGS workshop for the Bioinformatics Hub
Material for the R Training afternoon held at Roseworthy 1st May, 2017