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UvA-MAD

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  1. rnaxcount rnaxcount Public

    Pipeline for mapping and counting small RNAs.

    Python 1

  2. rRNA-profiler rRNA-profiler Public

    R

  3. faradpy faradpy Public

    Python

  4. faradr faradr Public

    R

  5. smallNGS-alignment smallNGS-alignment Public

    norm_spikes_40

    R

  6. rnaxqc rnaxqc Public

    quality controll of rna expression measurements

    R

Repositories

Showing 10 of 14 repositories
  • Crunchomics_Documentation Public
    UvA-MAD/Crunchomics_Documentation’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Jul 5, 2024
  • rdm-tape-scripts Public
    UvA-MAD/rdm-tape-scripts’s past year of commit activity
    Shell 0 0 0 0 Updated May 31, 2023
  • NGS-pipelines Public

    MAD-RBAB Pipelines for analysis of NGS experiments

    UvA-MAD/NGS-pipelines’s past year of commit activity
    Python 0 GPL-3.0 1 0 0 Updated Apr 16, 2021
  • kanweg Public
    UvA-MAD/kanweg’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Jan 27, 2021
  • faradr Public
    UvA-MAD/faradr’s past year of commit activity
    R 0 0 0 0 Updated Aug 16, 2016
  • SeqLibR Public

    R package to with sequence utilities

    UvA-MAD/SeqLibR’s past year of commit activity
    C 0 0 0 0 Updated Oct 7, 2015
  • rnaxqc Public

    quality controll of rna expression measurements

    UvA-MAD/rnaxqc’s past year of commit activity
    R 0 0 0 0 Updated Nov 26, 2014
  • zebrafish_scripts Public Forked from rauwerda/zebrafish_scripts

    zebrafish

    UvA-MAD/zebrafish_scripts’s past year of commit activity
    R 0 1 0 0 Updated Nov 25, 2014
  • basicQC Public

    Raw reads QC at experiment level with knitr.

    UvA-MAD/basicQC’s past year of commit activity
    R 0 0 0 0 Updated Nov 24, 2014
  • sRNA-norm Public

    Normalisation for small RNA sequencing data.

    UvA-MAD/sRNA-norm’s past year of commit activity
    R 0 0 0 0 Updated Nov 24, 2014
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