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updated mapping report tests
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CraigPorter committed May 18, 2012
1 parent 3a7c095 commit 9932d82
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion t/Pathogens/MappingReport.t
Original file line number Diff line number Diff line change
Expand Up @@ -57,7 +57,7 @@ my %assembly = ( name => 'Sue_FMNH_PR_2081', reference_size => 23298589);
my %mapper = ( name_a => 'velocimapper', version_a => '0.0.1',
name_b => 'dinomap', version_b => '0.0.2' );

my %mapstats_qc = (raw_reads => 1438046, raw_bases => 109291496, clip_bases => 108674266,
my %mapstats_qc = (is_qc => 1, raw_reads => 1438046, raw_bases => 109291496, clip_bases => 108674266,
reads_mapped => 1423575, reads_paired => 1393135, bases_mapped => 107477960,
rmdup_reads_mapped => 1423083, rmdup_bases_mapped => 107443038,
adapter_reads => 83, error_rate => 0.00297524, mean_insert => 315.6, sd_insert => 42.6,
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