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@VoigtLab

Voigt Lab

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  1. dnaplotlib dnaplotlib Public

    DNA plotting library for Python

    Python 287 73

  2. predict-lab-origin predict-lab-origin Public

    Software for article "Deep learning to predict the lab-of-origin of engineered DNA"

    Python 13 9

  3. MIT-BroadFoundry MIT-BroadFoundry Public

    Tools developed as part of the MIT-Broad Foundry for Synthetic Biology

    Python 7 3

  4. biofilms biofilms Public

    Files accompanying Moser, et al. (2019) Biofilm paper

    2

  5. Comprehensive_Genetic_Circuit_Analysis Comprehensive_Genetic_Circuit_Analysis Public

    Files accompanying Espah Borujeni, et al. (2020)

    Python 2 1

  6. promoter-library-design-tool promoter-library-design-tool Public

    Relevant files for Moser, et al (2018). Dynamic control of endogenous metabolism with combinatorial logic circuits.

    MATLAB 1 2

Repositories

Showing 10 of 15 repositories
  • bioHSI Public Forked from itai-levin/bioHSI
    VoigtLab/bioHSI’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Sep 4, 2024
  • dnaplotlib Public

    DNA plotting library for Python

    VoigtLab/dnaplotlib’s past year of commit activity
    Python 287 MIT 73 2 1 Updated Mar 20, 2024
  • plant-microbe-communication Public

    Files accompanying Boo and Toth et al. (2023)

    VoigtLab/plant-microbe-communication’s past year of commit activity
    ImageJ Macro 1 1 0 0 Updated Jan 29, 2024
  • DNA_sentinels Public

    Files accompanying Nou et al. (2023)

    VoigtLab/DNA_sentinels’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Aug 4, 2023
  • EcN_analysis Public

    Files accompanying Triassi, et al. (2023)

    VoigtLab/EcN_analysis’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jun 9, 2023
  • linalool_pathway_simulation Public

    Files accompanying JH Park et. al. 2022

    VoigtLab/linalool_pathway_simulation’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 22, 2022
  • ripp-design Public

    Jupyter notebooks and associated data for designing enzyme-modified peptides

    VoigtLab/ripp-design’s past year of commit activity
    Jupyter Notebook 1 MIT 1 0 0 Updated Nov 23, 2021
  • ripp-analysis Public

    Code and notebooks for analysis of LC-MS data of RiPP modification

    VoigtLab/ripp-analysis’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 19, 2021
  • constr-peptide-paper-figs Public

    Code used to generate plots in "Selection for constrained peptides that bind to a single target protein" Andrew M. King, et al.

    VoigtLab/constr-peptide-paper-figs’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Sep 21, 2021
  • Promoter_Activity_Quantification Public

    Files accompanying Shao, et al. (2020)

    VoigtLab/Promoter_Activity_Quantification’s past year of commit activity
    MATLAB 1 0 0 0 Updated Oct 14, 2020
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