Pinned repositories

  1. CIRCexplorer2

    circular RNA analysis toolset

    Python 31 14

  2. TERate

    TERate is a computational pipeline to measure transcription elongation rates (TERs) with 4sUDRB-Seq.

    Shell 4

  3. CIRCfinder

    A pipeline to map junction reads for circular intronic RNAs (ciRNAs)

    Python 4 4

  4. CIRCpseudo

    Pipeline for circRNA-derived pseudogenes

    Perl 1 1

  5. CSI

    Complementary Sequence Index (CSI)

    Python 3 1

  • circular RNA analysis toolset

    Python 31 14 Updated Oct 27, 2018
  • Python Updated Jul 18, 2018
  • A combined strategy to identify circular RNAs (circRNAs and ciRNAs) (Zhang et al., Complementary Sequence-Mediated Exon Circularization, Cell (2014), 159:134-147)

    Python 39 18 Updated Dec 12, 2017
  • Pipeline for circRNA-derived pseudogenes

    Perl 1 1 Updated Apr 27, 2017
  • Convert BAM files to bigWig files with a simple command

    Shell 11 8 MIT Updated Mar 21, 2017
  • Complementary Sequence Index (CSI)

    Python 3 1 Updated Dec 13, 2016
  • TERate is a computational pipeline to measure transcription elongation rates (TERs) with 4sUDRB-Seq.

    Shell 4 MIT Updated Apr 12, 2016
  • A pipeline to map junction reads for circular intronic RNAs (ciRNAs)

    Python 4 4 MIT Updated Mar 25, 2016

Most used topics

Loading…

0

People

This organization has no public members. You must be a member to see who’s a part of this organization.