Wrong: no applicable method for 'unnest' applied to an object of class

[Wengen-Zhu]

When I follow the data analysis process of MicrobiotaProcess in wechat（https://mp.weixin.qq.com/s/fG7I4TrUAROmyIDobN06yw）.

trda %>% unnest(RareAbundanceBySample) 

RareAbundanceBytime则是每个分组下的物种丰度信息

The following error occurs:

Error in UseMethod("unnest") :    no applicable method for 'unnest' applied to an object of class "c('MPSE', 'SummarizedExperiment', 'RectangularData', 'Vector', 'Annotated', 'vector_OR_Vector')"

I can't solve this problem, anyone who has encountered and dealed with this problem? Thanks.

[xiangpin]

the trda should be extracted from mpse object, using mp_extract_taxatree.
Please follow the newest vignette of MicrobiotaProcess

[Wengen-Zhu]

I got it. Thank you！ | | 朱文根 | | ***@***.*** | ---- Replied Message ---- | From | Shuangbin ***@***.***> | | Date | 4/18/2023 17:50 | | To | ***@***.***> | | Cc | ***@***.***> , ***@***.***> | | Subject | Re: [YuLab-SMU/MicrobiotaProcess] Wrong: no applicable method for 'unnest' applied to an object of class (Issue #89) | the trda should be extracted from mpse object, using mp_extract_taxatree. Please follow the newest vignette of MicrobiotaProcess — Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you authored the thread.Message ID: ***@***.***>