Change how foldcomp datasets are downloaded to specific location (#339)

* change how foldcomp datasets are downloaded to specific location

* fix typo

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* update changelog

* Bump version strings

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

CHANGELOG.md

@@ -1,3 +1,11 @@
+### 1.7.3 - 30/08/2023
+
+* Fixes edge case in FoldComp database download if target directory has same name as database ([#339](https://github.com/a-r-j/graphein/pull/339))
+
+### 1.7.2 - 28/08/2023
+
+* Pins BioPandas version to latest
+
 ### 1.7.1 - 26/07/2023
 
 #### New Features

docs/source/conf.py

@@ -34,7 +34,7 @@
 copyright = f"{datetime.datetime.now().year}, {author}"
 
 # The full version, including alpha/beta/rc tags
-release = "1.7.2"
+release = "1.7.3"
 
 
 # -- General configuration ---------------------------------------------------

graphein/__init__.py

@@ -12,7 +12,7 @@
 from .testing import *
 
 __author__ = "Arian Jamasb <arian@jamasb.io>"
-__version__ = "1.7.2"
+__version__ = "1.7.3"
 
 
 logger.configure(

graphein/ml/datasets/foldcomp_dataset.py

@@ -205,16 +205,19 @@ def download(self):
             os.path.exists(self.root / f) for f in self._database_files
         ):
             log.info(f"Downloading FoldComp dataset {self.database}...")
+            curr_dir = os.getcwd()
+            os.chdir(self.root)
             try:
                 foldcomp.setup(self.database)
             except RuntimeError:
                 _ = self.async_setup()
                 asyncio.run(_)
+            os.chdir(curr_dir)
             log.info("Download complete.")
-            log.info("Moving files to raw directory...")
+            # log.info("Moving files to raw directory...")
 
-            for f in self._database_files:
-                shutil.move(f, self.root)
+            # for f in self._database_files:
+            #    shutil.move(f, self.root)
         else:
             log.info(f"FoldComp database already downloaded: {self.root}.")