fix peptide bonds for all atom graphs #254
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Reference Issues/PRs
#253
What does this implement/fix? Explain your changes
Ensures peptide bond addition behaves correctly on all-atom graphs.
What testing did you do to verify the changes in this PR?
Adds a filtering step in the edge addition to only consider N and C atom nodes in the case of an all-atom graph.
Pull Request Checklist
./CHANGELOG.mdfile (if applicable)./graphein/tests/*directories (if applicable)./notebooks/(if applicable)python -m py.test tests/and make sure that all unit tests pass (for small modifications, it might be sufficient to only run the specific test file, e.g.,python -m py.test tests/protein/test_graphs.py)black .andisort .