Command Line Tool to obtain FileID of inserted mincs using a lists of SeriesUID as STDIN #155
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@gluneau Tested it. Very good :) |
samirdas
reviewed
Oct 21, 2016
| my $queryT = "SELECT * FROM tarchive_series as t LEFT JOIN tarchive as a USING (TarchiveID) WHERE t.SeriesUID=?"; | ||
| my $queryM = "SELECT * FROM mri_protocol_violated_scans as m WHERE m.SeriesUID=? OR (m.PatientName=? AND m.series_description=?)"; | ||
| my $queryV = "SELECT * FROM mri_violations_log as v WHERE v.SeriesUID=?"; | ||
| my $queryP = "SELECT (SELECT pf.`VALUE` FROM parameter_file AS pf WHERE pf.FileID=56788 AND pf.ParameterTypeID=182) AS xspace, (SELECT pf.`VALUE` FROM parameter_file AS pf WHERE pf.FileID=? AND pf.ParameterTypeID=171) AS zspace, IFNULL((SELECT pf.`VALUE` FROM parameter_file AS pf WHERE pf.FileID=? AND pf.ParameterTypeID=337), 1) as time"; |
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hardcoded IDs; to be fixed
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@gluneau Ready to be tested? |
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This tool will help figure out if the dicom files you have are inserted in loris.
Example of use:
for i in $(find -type f); do dcmdump $i | grep SeriesInstanceUID; done | sort | uniq | cut -d "[" -f2 | cut -d "]" -f1 | /data/ibis/bin/mri/tools/seriesuid2fileid