Change CI test data to repo hosted on GIN

.circleci/config.yml

@@ -558,6 +558,6 @@ workflows:
               test_data_cache_version: ["5"]
           filters:
             tags:
-              only: /AFNI_\d\d.\d.\d\d/
+              ignore: /.*/
             branches:
-              only: /.*/
+              ignore: /.*/

.gitmodules

@@ -1,3 +1,3 @@
 [submodule "tests/afni_ci_test_data"]
 	path = tests/afni_ci_test_data
-	url = https://github.com/afni/afni_ci_test_data.git
+	url = https://gin.g-node.org/leej3/afni_ci_test_data.git

tests/afni_test_utils/data_management.py

@@ -64,7 +64,7 @@ def get_tests_data_dir(config_obj):
                 logger.warn("Installing test data")
                 datalad.install(
                     str(tests_data_dir),
-                    "https://github.com/afni/afni_ci_test_data.git",
+                    "https://gin.g-node.org/leej3/afni_ci_test_data",
                     recursive=True,
                     on_failure="stop",
                 )

tests/afni_test_utils/run_tests_func.py

@@ -55,10 +55,7 @@ def run_tests(tests_dir, **args_dict):
         # append gcovr to assemble coverage report for C code
         cmd += f"; gcovr -s --xml -o {tests_dir}/gcovr_output.xml -r {args_dict['build_dir']}/src"
         # append command for compiling and uploading codecov report
-
-        # apparently there is a security issue here, must investigate
-        # cmd += "; bash -c 'bash <(curl -s https://codecov.io/bash)'"
-        # sys.exit(1)
+        cmd += "; bash -c 'bash <(curl -s https://codecov.io/bash)'"
 
     print(f"Executing: {cmd}")
     res = subprocess.run(cmd, shell=True, env=os.environ.copy())

tests/scripts/test_testing_script_functionality.py

@@ -718,9 +718,7 @@ def test_run_tests_container_subparsers_works(monkeypatch, argslist, mocked_scri
                 "ARGS='{DEFAULT_ARGS} {PYTEST_COV_FLAGS}' "
                 "ninja pytest;"
                 " gcovr -s --xml -o {TESTS_DIR}/gcovr_output.xml -r {params['args_in']['build_dir']}/src;"
-                " echo ======= REFUSING TO GO TO codecov.io ======== "
-                # there may be a security issue with getting the script this way
-                # " bash -c 'bash <(curl -s https://codecov.io/bash)'"
+                " bash -c 'bash <(curl -s https://codecov.io/bash)'"
             ),
         },
     ],