FloPy Modflow6 continuous integration #173
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name: FloPy Modflow6 continuous integration | |
on: | |
schedule: | |
- cron: '0 8 * * *' # run at 8 AM UTC (12 am PST) | |
push: | |
branches: | |
- master | |
- develop | |
- release* | |
- ci-diagnose* | |
pull_request: | |
branches: | |
- master | |
- develop | |
jobs: | |
test: | |
name: Modflow6 FloPy tests | |
runs-on: ubuntu-latest | |
strategy: | |
fail-fast: false | |
defaults: | |
run: | |
shell: bash | |
steps: | |
- name: Checkout flopy repo | |
uses: actions/checkout@v3 | |
- name: Setup Python | |
uses: actions/setup-python@v4 | |
with: | |
python-version: 3.9 | |
cache: 'pip' | |
cache-dependency-path: pyproject.toml | |
- name: Install Python dependencies | |
run: | | |
pip install --upgrade pip | |
pip install https://github.com/modflowpy/pymake/zipball/master | |
pip install https://github.com/Deltares/xmipy/zipball/develop | |
pip install https://github.com/MODFLOW-USGS/modflowapi/zipball/develop | |
pip install .[test,optional] | |
- name: Install gfortran | |
uses: modflowpy/install-gfortran-action@v1 | |
- name: Checkout MODFLOW 6 | |
uses: actions/checkout@v3 | |
with: | |
repository: MODFLOW-USGS/modflow6 | |
path: modflow6 | |
- name: Update flopy MODFLOW 6 classes | |
working-directory: modflow6/autotest | |
run: | | |
python update_flopy.py | |
- name: Install meson | |
run: | | |
pip3 install meson ninja | |
- name: Setup modflow | |
working-directory: modflow6 | |
run: | | |
meson setup builddir --buildtype=debugoptimized --prefix=$(pwd) --libdir=bin | |
- name: Build modflow | |
working-directory: modflow6 | |
run: | | |
meson compile -C builddir | |
- name: Install modflow | |
working-directory: modflow6 | |
run: | | |
meson install -C builddir | |
- name: Get executables | |
working-directory: modflow6/autotest | |
env: | |
GITHUB_TOKEN: ${{ github.token }} | |
run: | | |
pytest -v --durations=0 get_exes.py | |
- name: Run tests | |
working-directory: modflow6/autotest | |
run: | | |
pytest -v -n auto -k "test_gw" --durations=0 --cov=flopy --cov-report=xml | |
- name: Print coverage report before upload | |
working-directory: ./modflow6/autotest | |
run: | | |
coverage report | |
- name: Upload coverage to Codecov | |
uses: codecov/codecov-action@v2.1.0 | |
with: | |
directory: ./modflow6/autotest | |
file: coverage.xml |