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analysis
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readme.md
run_all.R

readme.md

Evidence for systemic age underestimation in shark and ray ageing studies

Alastair Harry

Published scientific manuscript:

Harry AV. Evidence for systemic age underestimation in shark and ray ageing studies. Fish Fish. 2017;00:1–16. https://doi.org/10.1111/faf.12243

DOI

To reproduce analysis run source("run_all.R").

Repository structure:

/
├── age-underestimation.Rproj
├── analysis
│   ├── data prep.R
│   ├── setup.R
│   └── summary.R
├── data
│   ├── data.csv
│   ├── data1.csv
│   └── definitions.csv
├── readme.md
├── references
│   ├── Age underestimation extra.bib
│   ├── Age underestimation.bib
│   └── fish-and-fisheries.csl
├── reports
│   ├── Figures.pdf
│   ├── Figures.tex
│   ├── Figures_files
│   ├── Manuscript.pdf
│   ├── Manuscript.tex
│   ├── Supplementary material 2.pdf
│   ├── Supplementary material 2.tex
│   ├── Supplementary material.pdf
│   ├── Supplementary material.tex
│   ├── Supplementary material_files
│   ├── Tables.pdf
│   └── Tables.tex
├── rmds
│   ├── Figures.Rmd
│   ├── Manuscript.Rmd
│   ├── Supplementary material 2.Rmd
│   ├── Supplementary material.Rmd
│   └── Tables.Rmd
└── run_all.R

Erratum

  • The scientific name for Thorny Skate (Amblyraja radiata) was mistakenly given as that for the Winter Skate (Leucoraja ocellata) throughout the paper and vice versa.
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