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Fix an instance of example_cell_clustering
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alex-l-kong committed Dec 15, 2022
1 parent 95fe5f7 commit 462b99a
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion ark/phenotyping/cell_cluster_utils.py
Original file line number Diff line number Diff line change
Expand Up @@ -87,7 +87,7 @@ def compute_cell_cluster_channel_avg(fovs, channels, base_dir,
base_dir (str):
The path to the data directory
weighted_cell_channel_name (str):
The name of the weighted cell table, created in `example_cell_clustering.ipynb`
The name of the weighted cell table, created in `3_Pixie_Cluster_Cells.ipynb`
cell_cluster_name (str):
Name of the file containing the cell data with cluster labels
cell_cluster_col (str):
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