Merge branch 'master' into check_cov

angelolab · Oct 28, 2020 · cb22734 · cb22734
2 parents 81ee9d6 + d71eb75
commit cb22734
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/ark/utils/deepcell_service_utils.py b/ark/utils/deepcell_service_utils.py
@@ -3,7 +3,7 @@
 from kiosk_client import manager
 import os
 import glob
-from zipfile import ZipFile
+from zipfile import ZipFile, ZIP_DEFLATED
 import warnings
 
 from ark.utils import misc_utils
@@ -65,7 +65,7 @@ def create_deepcell_output(deepcell_input_dir, deepcell_output_dir, fovs=None,
     # write all files to the zip file
     print('Zipping preprocessed tif files.')
 
-    with ZipFile(zip_path, 'w') as zipObj:
+    with ZipFile(zip_path, 'w', compression=ZIP_DEFLATED) as zipObj:
         for fov in fovs:
             # file has .tif extension
             if fov + '.tif' in input_files: