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Code for Important Processing Steps For .Tiff or .Raw Video Files Acquired From 2-Photon Imaging System + Completely Automated and With NWB Schema (.HDF5) Capability

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ankushgpta2/2PhotonProcessor

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deepinterpolation
deepinterpolation
 
 
fluor_extract_from_denoised_h5
fluor_extract_from_denoised_h5
 
 
main_scripts
main_scripts
 
 
motion_correction
motion_correction
 
 
nwb
nwb
 
 
spike_deconv
spike_deconv
 
 
README.md
README.md
 
 

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2PhotonProcessing

Code for important processing steps for .tiff or .raw video files acquired from 2-Photon Imaging system + NWB structure storage capability

Pipeline is completely automated and can be ran completely through via MATLAB and Python scripts

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Code for Important Processing Steps For .Tiff or .Raw Video Files Acquired From 2-Photon Imaging System + Completely Automated and With NWB Schema (.HDF5) Capability

Topics

metadata timeseries physics neuroscience statistical-mechanics videos neurons scaling microscopy 2-photon criticality renormalization-group

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