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Code for Important Processing Steps For .Tiff or .Raw Video Files Acquired From 2-Photon Imaging System + Completely Automated and With NWB Schema (.HDF5) Capability

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ankushgpta2/2PhotonProcessor

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deepinterpolation

deepinterpolation

 
 

fluor_extract_from_denoised_h5

fluor_extract_from_denoised_h5

 
 

main_scripts

main_scripts

 
 

motion_correction

motion_correction

 
 

nwb

nwb

 
 

spike_deconv

spike_deconv

 
 

README.md

README.md

 
 

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2PhotonProcessing

Code for important processing steps for .tiff or .raw video files acquired from 2-Photon Imaging system + NWB structure storage capability

Pipeline is completely automated and can be ran completely through via MATLAB and Python scripts

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Code for Important Processing Steps For .Tiff or .Raw Video Files Acquired From 2-Photon Imaging System + Completely Automated and With NWB Schema (.HDF5) Capability

Topics

metadata timeseries physics neuroscience statistical-mechanics videos neurons scaling microscopy 2-photon criticality renormalization-group

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