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IMOS Toolbox v2.5.32 - 29 Aug 2017

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@ggalibert ggalibert released this 29 Aug 08:03
· 129 commits to 2.5 since this release

Changes from 2.5.31:

  • Oxygen calculations are removed from parsers to be performed by a dedicated pre-processing routine using GibbsSeaWater toolbox. This new oxygenPP routine has ben added to the list of default PP routines that needs to be performed in the toolboxProperties.txt config file: this will likely create a conflict with your cloned copy see this example on how to resolve. A unit test has been added to check oxygen calculations. This unit test is ran before trying to compile a binary. This change moves all the oxygen calcs from the instrument read routines to a oxygen pre-processor. Also test for checking the output from the pre-processing against Sea-Bird calculation. dc1a63b
  • In convertSBEcnvVar.m, SBE oxsol and oxsat are different from the actual o2 reading from the instrument. These parameters are not read any more. Also fix bug on supporting voltage outputs with non word characters in their label. 967bed0
  • Improved SBE cnv model string regexp. A unit test has been added and is ran before trying to compile. dfb00c6
  • In magneticDeclinationPP, improve IF conditions for when a user is prompted to manually enter missing depth, latitude and longitude. efa5a58
  • TIME flags are now taken into account for graphing timeSeries so that X axis is auto set to good/probablyGood/nonQC data only. 4152f11
  • Fix timeDriftPP to be able to run without DDB. c87276e
  • rearrange files in Seawater directory so that gsw_ files are stored in the same hierarchy as what TEOS-10 provides. 9c3454b
  • Updated GSW toolbox from v3.05 to v3.06. 87aa02a
  • Handle alternate wap format (AWAC wave ASCII file format) with only 15 column. Add support to more wave variables in historical 31 column format. CF standard name sea_surface_wave_zero_upcrossing_period has been replaced by sea_surface_wave_mean_period in v45 of CF stnadrad name table so that IMOS parameter code VAVT can be replaced by WPMH. ad46cbd
  • New function Parser/addAWACWaveToSample.m created so that can be used by other parsers than awacParse.m. 1f73834
  • Fix makeNetCDFCompliant for case when DDB field Sensors.Parameter is empty. a6161b1
  • Refactor database query interface. Select between DDB and CSV database interface at DDB/executeQuery 859b584
  • Fix JDBCDDB.java so that last column of a table is retrieved. Updated ddb.jar accordingly. 4daebca
  • Get rid of any call to old Seawater toolbox EOS-80. The new Gibbs-SeaWater toolbox TEOS-10 is now exclusively used. 06ffea2
  • Update list of required files for the reading of Nortek wave data. 54d32a6
  • Capture directional/compass offset from Nortek .whr wave file. a96fa0b
  • Improved depthPP for the case when only one P sensor is available. Before, the same displacement seen on the nearest P sensor from its nominal depth was applied to the current sensor. Now we take into account the site nominal depth in order to locate the current sensor. The current limitation is that the tidal amplitude is flattenned (the actual site depth varies with time != site nominal depth). efd7e97
  • Added new parser for .tid files produced by SBE26. a6defb0
  • Increment version to 2.5.32 and update binaries accordingly. 8c46f5f