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Update to BioFormats 5.9.1
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aoles committed Aug 21, 2018
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4 changes: 2 additions & 2 deletions DESCRIPTION
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Package: RBioFormats
Version: 0.0.51
BioFormats: 5.9.0
Version: 0.0.52
BioFormats: 5.9.1
Title: R interface to Bio-Formats
Description: An R package which interfaces the OME Bio-Formats Java library to
allow reading of proprietary image data and metadata.
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20 changes: 10 additions & 10 deletions vignettes/RBioFormats.html
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<meta name="author" content="Andrzej Oleś" />

<meta name="date" content="2018-04-23" />
<meta name="date" content="2018-08-21" />

<title>RBioFormats: an R interface to the Bio-Formats library</title>

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<h1 class="title toc-ignore">RBioFormats: an R interface to the Bio-Formats library</h1>
<p class="author-name">Andrzej Oleś</p>
<h4 class="date"><em>23 April 2018</em></h4>
<h4 class="date"><em>21 August 2018</em></h4>
<h4 class="package">Package</h4>
<p>RBioFormats 0.0.49 (Bio-Formats library version: 5.8.2)</p>
<p>RBioFormats 0.0.52 (Bio-Formats library version: 5.9.1)</p>

</div>

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## [1] stats graphics grDevices utils datasets methods base
##
## other attached packages:
## [1] XML_3.98-1.10 RBioFormats_0.0.49 rJava_0.9-9
## [4] knitr_1.20 BiocStyle_2.7.8
## [1] XML_3.98-1.10 RBioFormats_0.0.52 rJava_0.9-10
## [4] knitr_1.20 BiocStyle_2.8.2
##
## loaded via a namespace (and not attached):
## [1] Rcpp_0.12.16 magrittr_1.5 BiocGenerics_0.25.3
## [4] EBImage_4.21.3 lattice_0.20-35 jpeg_0.1-8
## [1] Rcpp_0.12.17 magrittr_1.5 BiocGenerics_0.25.3
## [4] EBImage_4.23.2 lattice_0.20-35 jpeg_0.1-8
## [7] stringr_1.3.0 tools_3.5.0 parallel_3.5.0
## [10] grid_3.5.0 xfun_0.1 png_0.1-7
## [13] htmltools_0.3.6 yaml_2.1.18 abind_1.4-5
## [13] htmltools_0.3.6 yaml_2.1.19 abind_1.4-5
## [16] rprojroot_1.3-2 digest_0.6.15 bookdown_0.7
## [19] htmlwidgets_1.0 bitops_1.0-6 fftwtools_0.9-8
## [19] htmlwidgets_1.2 bitops_1.0-6 fftwtools_0.9-8
## [22] RCurl_1.95-4.10 evaluate_0.10.1 rmarkdown_1.9
## [25] tiff_0.1-5 stringi_1.1.7 compiler_3.5.0
## [28] backports_1.1.2 locfit_1.5-9.1</code></pre>
Expand All @@ -458,7 +458,7 @@ <h1>Appendix A: Working with test images</h1>
require(&quot;EBImage&quot;)</code></pre>
<pre><code>## Loading required package: EBImage</code></pre>
<pre class="r"><code>display(img, method = &quot;raster&quot;)</code></pre>
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width="256px" height="256px" /></p>
<p>Note that the native image data range is different depending on pixel type:</p>
<table>
<thead>
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