v0.7.0 bump

aryeelab · Sep 2, 2017 · 004e8a0 · 004e8a0
1 parent 35bc78c
commit 004e8a0
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Showing 4 changed files with 8 additions and 3 deletions.
diff --git a/Authors.rst b/Authors.rst
@@ -15,4 +15,6 @@ Supervisor
 Contributors
 ------------
 
-None yet. Make yours today!
+* Alejandro Reyes <alejandro.reyes.ds@gmail.com>
+
+
diff --git a/NEWS b/NEWS
@@ -1,3 +1,6 @@
+# 0.6.2
+- Fixed error associated with new files being produced from newer versions of HiC-Pro
+
 # 0.6.0
 - Fixed inconsistencies with duplicates
 

diff --git a/hichipper/interactionsCall.sh b/hichipper/interactionsCall.sh
@@ -26,7 +26,7 @@ echo "`date`: Mapped_unique_quality_valid_pairs=${Mapped_unique_quality_valid_pa
 
 # Merge gaps; check bedtools
 echo "`date`: Intersecting PETs with anchors" | tee -a $LOG_FILE
-sortBed -i "${WK_DIR}/${PEAKFILE}" | bedtools merge -d $MERGE_GAP -i stdin > "${WK_DIR}/${OUT_NAME}/${SAMPLE}_temporary_peaks.merged.bed.tmp"
+bedtools sort -i "${WK_DIR}/${PEAKFILE}" | bedtools merge -d $MERGE_GAP -i stdin > "${WK_DIR}/${OUT_NAME}/${SAMPLE}_temporary_peaks.merged.bed.tmp"
 
 minimumsize=10
 actualsize=$(wc -c < "${WK_DIR}/${OUT_NAME}/${SAMPLE}_temporary_peaks.merged.bed.tmp")

diff --git a/setup.py b/setup.py
@@ -7,7 +7,7 @@
 
 setup(
     name='hichipper',
-    version='0.6.1v2',
+    version='0.7.0',
     url='https://github.com/aryeelab/hichipper',
     license='MIT',
     author='Caleb Lareau and Martin Aryee',