Bug fixes #14
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Bug fixes #14
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added 11 commits
February 13, 2018 17:34
…tion adding in RILseq_significant_interactions.py
…s.gff file. this is done by using the .fsa files in the bc-dir
added a conversion to the bc-dir chromosome names if a conversion dict is applied version 0.62
…e BioCyc test directory
added support for cyclic genome in generate_wig() checking IGR for the same transcript names added linux lineterminator in the map_chimeric_fragments output added support for rRNA list instead of a string change EC_dir to BC_dir added printing of RILseq version code documentation added
Conflicts: RILseq/__init__.py RILseq/ecocyc_parser.pyc bin/generate_BED_file_of_endpoints.py setup.py
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Hey asaf, I pulled and merged all old changes with the new pysam attributes.
I've fixed some bugs and added documentation and the automatic creation of table S1