RILseq 0.48 #3
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RILseq 0.48 #3
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added 2 commits
May 17, 2017 18:39
…imeric_fragments.py. processors (-t) can be added to --bwa_params parameter. Default values unchanged. 2. Changed the bwa_params in map_single_fragments, and erased the -k 1 -l 20 params (The use of seeding). 3. Bug fix in ecocyc_parser.py when the directory name had '-'. (when reading the .fsa file from the ecocyc_dir) 4. Cosmetic In RILseq_significant_regions.py: change --ec_dir to --bc_dir 5. Bugfix in plot_region_interactions.py: replaced an "and" with an "or" in one of the conditions and added additional text to the figure. 6. added consideration to '#' or '@' in __init__.py in read_transcripts(). 7. Changed documentation in RILseq_significant_regions.py --ribozero to "Remove rRNA prior to the statistical analysis." 8. Added a folder named run_example containing a tar file with results file from runs with stat libraries.
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processors (-t) can be added to --bwa_params parameter.
Default values unchanged.
replaced an "and" with an "or" in one of the conditions and added additional text to the figure.