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Macauff pipeline boilerplate #152

Merged
merged 12 commits into from Oct 30, 2023
Merged

Macauff pipeline boilerplate #152

merged 12 commits into from Oct 30, 2023

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maxwest-uw
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Change Description

creates the basic boilerplate for the macauff import pipeline.

part 1 of #147

  • creates the MacauffArguments dataclass
  • creates a runner for the macauff import
  • creates a full test suite for MacauffArguments
  • creates some placeholder tests for the import runner
  • My PR includes a link to the issue that I am addressing

Solution Description

implementation partially based on #126 .

Code Quality

  • I have read the Contribution Guide
  • My code follows the code style of this project
  • My code builds (or compiles) cleanly without any errors or warnings
  • My code contains relevant comments and necessary documentation

Project-Specific Pull Request Checklists

New Feature Checklist

  • I have added or updated the docstrings associated with my feature using the NumPy docstring format
  • I have updated the tutorial to highlight my new feature (if appropriate)
  • I have added unit/End-to-End (E2E) test cases to cover my new feature
  • My change includes a breaking change
    • My change includes backwards compatibility and deprecation warnings (if possible)

@codecov
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codecov bot commented Oct 25, 2023

Codecov Report

Merging #152 (49c9310) into main (0af18cd) will not change coverage.
Report is 1 commits behind head on main.
The diff coverage is 100.00%.

@@            Coverage Diff            @@
##              main      #152   +/-   ##
=========================================
  Coverage   100.00%   100.00%           
=========================================
  Files           24        26    +2     
  Lines         1022      1051   +29     
=========================================
+ Hits          1022      1051   +29     
Files Coverage Δ
...rc/hipscat_import/cross_match/macauff_arguments.py 100.00% <100.00%> (ø)
...c/hipscat_import/cross_match/run_macauff_import.py 100.00% <100.00%> (ø)

... and 8 files with indirect coverage changes

📣 We’re building smart automated test selection to slash your CI/CD build times. Learn more

@delucchi-cmu
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One more! Can you run black on all the changed files before merging?

@maxwest-uw maxwest-uw merged commit 46ee668 into main Oct 30, 2023
13 checks passed
@maxwest-uw maxwest-uw deleted the macauff_pipeline branch October 30, 2023 20:53
delucchi-cmu added a commit that referenced this pull request Nov 6, 2023
* Set lower default import order. (#153)

* Macauff pipeline boilerplate (#152)

* checkpoint

* checkpoint

* testing for MacauffArguments

* create boilerplate for macauff runner + tests

* remove commented out test

* add __future__.annotations

* linter problems

* add more tests for missing coverage

* refactor MacauffArguments required parameter tests

* address more comments from pr #152

* add dask pytest mark + black formatting

* Add a partition_info on SOAP results. (#157)

* Initial commit of metadata file conversion (#156)

* Initial commit of metadata file conversion

* Move shared logic for locating input files.

* Explicitly depend on pyyaml

---------

Co-authored-by: Max West <110124344+maxwest-uw@users.noreply.github.com>
delucchi-cmu added a commit that referenced this pull request Nov 6, 2023
* Use existing hipscat_index for mapping pixel

* Update required version.

* Merge recent changes (#163)

* Set lower default import order. (#153)

* Macauff pipeline boilerplate (#152)

* checkpoint

* checkpoint

* testing for MacauffArguments

* create boilerplate for macauff runner + tests

* remove commented out test

* add __future__.annotations

* linter problems

* add more tests for missing coverage

* refactor MacauffArguments required parameter tests

* address more comments from pr #152

* add dask pytest mark + black formatting

* Add a partition_info on SOAP results. (#157)

* Initial commit of metadata file conversion (#156)

* Initial commit of metadata file conversion

* Move shared logic for locating input files.

* Explicitly depend on pyyaml

---------

Co-authored-by: Max West <110124344+maxwest-uw@users.noreply.github.com>

* Exercise more hipscat_index behavior.

---------

Co-authored-by: Max West <110124344+maxwest-uw@users.noreply.github.com>
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2 participants