Releases: auerlab/peak-classifier
Releases · auerlab/peak-classifier
Update for biolibc API changes
Update for bl_gff_t API streamlining
Biolibc 0.2.2 API updates
Updates for biolibc and libxtend API improvements
Additional improvements to build system and documentation
Updates for evolving library APIs
Updates for libxtend and biolibc API changes
Improvements to build system
Minor bug fixes
Updates for new biolibc API, add extract-genes script
Update to use new biolibc API
Add extract-genes script to generate inputs for feature-view.py
Improve test scripts
Other minor fixes and enhancements
Verified on GRCm38 and 39 mouse GFF3 and MACS2 peaks
Verified reasonable results using peaks from a 2020 mouse study
Numerous optimizations, enhancements and bug fixes
Improved man page
Add command line options for desired peak/feature overlap
Tested on FreeBSD, NetBSD, MacOS, and CentOS 7
First tag for packaging
Basic GFF processing functionality complete. Generates introns and upstream region features.