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  1. LDhat

    Estimate recombination rates from population genetic data

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  2. LDhot

    Detect recombination hotspots using population genetic data.

    C++ 7 2

  3. interference

    MATLAB code for estimating crossover interference under the Housworth-Stahl model.

    Matlab 3 1

  4. Campbell_et_al

    Recombination maps from Campbell et al., Nat Comms, 2015

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  5. viterbi

    Find shared haplotypes between individuals.

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  6. long_range_LD

    Find Long Range LD using TAPER algorithm

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