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update test
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rpetit3 committed Sep 8, 2023
1 parent d2d316b commit f156810
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions subworkflows/local/bakta/test.yml
Original file line number Diff line number Diff line change
Expand Up @@ -38,7 +38,7 @@
- path: bactopia/GCF_000292685/main/annotator/bakta/logs/nf-bakta.trace
contains: ['nextflow.trace']
- path: bactopia/GCF_000292685/main/annotator/bakta/logs/versions.yml
md5sum: c8777a852bba31bc43ba43e77c21e5f3
contains: ['bakta', 'makeblastdb']

- name: bakta-test-tarball
command: bash -c 'nextflow run ./subworkflows/local/bakta/test.nf -entry test_bakta_tarball --wf bakta -c nextflow.config ${BACTOPIA_ARGS}'
Expand Down Expand Up @@ -81,4 +81,4 @@
- path: bactopia/GCF_000292685/main/annotator/bakta/logs/nf-bakta.trace
contains: ['nextflow.trace']
- path: bactopia/GCF_000292685/main/annotator/bakta/logs/versions.yml
md5sum: 0f564c0e71fc143e201be6d3d12783db
contains: ['bakta', 'makeblastdb']

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