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cryptkeeper

Installation

Cryptkeeper is currently in development. Adventurous users can install dependencies on their own through other means. The simplest way to install Cryptkeeper is through conda by:

  • Cloning this repository to your machine
  • conda env create -f environment.yml
  • conda activate cryptkeeper
  • pip install ./

It may be necessary to install rhotermpredict, promotercalculator, and ostir from their repositories to avoid version mismatch as development continues.

Example

cd examples/BPMV
cryptkeeper -i pSMART-LCKan-BPMV1.fna -o pSMART-LCKan-BPMV1

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Tool for visualizing unintentional bacterial gene expression from a DNA sequence

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