@barricklab

Barrick Lab

Barrick Lab at the University of Texas at Austin

  • breseq is a computational pipeline for finding mutations relative to a reference sequence in short-read DNA re-sequencing data. It is intended for haploid microbial genomes (<20 Mb). breseq is a command line tool implemented in C++ and R. More information at

    C++ 40 3 Updated Aug 16, 2018
  • Plasmid mutation rate and segregation simulators

    Python Updated Jul 13, 2018
  • Evolutionary Failure Mode Calculator v2

    Python Updated Jul 6, 2018
  • General data analysis spreadsheets and scripts

    Python 2 Updated Jul 3, 2018
  • R 1 Updated Jun 11, 2018
  • NGS sample and read file management

    GAP Updated Jun 11, 2018
  • Evolutionary Failure Mode Calculator

    Python 2 1 Updated Jun 8, 2018
  • Code for analyzing sequencing data from Freshman Research Initiative genetic failure mode experiments

    GAP 1 Updated Jun 6, 2018
  • Python Updated Mar 2, 2018
  • Modeling the effects of mutations in proteins using PyRosetta

    Python 2 6 Updated Jan 26, 2018
  • Genomics resources for the long-term evolution experiment with Escherichia coli

    GAP 2 CC0-1.0 Updated Dec 31, 2017
  • 🍺🔬 Scientific formulae for the Homebrew package manager

    Ruby 932 Updated Oct 12, 2017
  • Scripts for nsAA measurement kit

    R Updated Oct 5, 2017
  • Simulator of evolutionary dynamics in asexual populations. Tools for creating Muller plots to visualize these dynamics.

    C++ GPL-3.0 Updated Aug 30, 2017
  • Broad-host-range Toolkit (BTK) for genetic engineering of non-model bacterial species

    Updated Aug 29, 2017
  • C++ 101 Updated Oct 22, 2015
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