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Bugfix/kbdev 1133 incorrect matching #108

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Bugfix/kbdev 1133 incorrect matching #108

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Commits on Nov 9, 2023

  1. Merge pull request #106 from bcgsc/master 

    Merge back master into develop
    @mathieulemieux
    mathieulemieux committed Nov 9, 2023
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Commits on Nov 16, 2023

  1. Change args names in compare_positional_variants

    @mathieulemieux
    mathieulemieux committed Nov 16, 2023
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  2. Remove unwanted ToDo

    @mathieulemieux
    mathieulemieux committed Nov 16, 2023
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Commits on Nov 20, 2023

  1. Precision in compare_positional_variants docstring

    @mathieulemieux
    mathieulemieux committed Nov 20, 2023
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  2. Formatting and comment in match_positional_variant

    @mathieulemieux
    mathieulemieux committed Nov 20, 2023
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  3. Move up type filtering in match_positional_variant

    @mathieulemieux
    mathieulemieux committed Nov 20, 2023
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  4. Refac. type_screening to structural_type_screening

    @mathieulemieux
    mathieulemieux committed Nov 20, 2023
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  5. Fix type filtering in match_positional_variant

    @mathieulemieux
    mathieulemieux committed Nov 20, 2023
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  6. Convert variant_types_details filter obj to list

    @mathieulemieux
    mathieulemieux committed Nov 20, 2023
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  7. Black formating

    @mathieulemieux
    mathieulemieux committed Nov 20, 2023
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Commits on Nov 22, 2023

  1. Black formating

    @mathieulemieux
    mathieulemieux committed Nov 22, 2023
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  2. Fix match_positional_variant for small variants

    @mathieulemieux
    mathieulemieux committed Nov 22, 2023
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  3. Black formating

    @mathieulemieux
    mathieulemieux committed Nov 22, 2023
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  4. delinsSpecialHandling in match_positional_variant

    @mathieulemieux
    mathieulemieux committed Nov 22, 2023
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Commits on Nov 27, 2023

  1. Fix fusion bug in stripDisplayName()

    @mathieulemieux
    mathieulemieux committed Nov 27, 2023
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  2. Add ToDo in TestStripDisplayName

    @mathieulemieux
    mathieulemieux committed Nov 27, 2023
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  3. Remove SMALL_MUTATION_VARIANT_ALIASES from const.

    @mathieulemieux
    mathieulemieux committed Nov 27, 2023
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  4. Add more data to tests

    @mathieulemieux
    mathieulemieux committed Nov 27, 2023
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  5. Add structural_type_adjustment()

    @mathieulemieux
    mathieulemieux committed Nov 27, 2023
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  6. update match_positional_variant docstring

    @mathieulemieux
    mathieulemieux committed Nov 27, 2023
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  7. Fix match.py imports

    @mathieulemieux
    mathieulemieux committed Nov 27, 2023
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  8. Better comments in compare_positional_variants()

    @mathieulemieux
    mathieulemieux committed Nov 27, 2023
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  9. Fix structural_type_screening() return type hint

    @mathieulemieux
    mathieulemieux committed Nov 27, 2023
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  10. Refactor category_variant_similarTo()

    @mathieulemieux
    mathieulemieux committed Nov 27, 2023
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  11. Better comments in match_positional_variant()

    @mathieulemieux
    mathieulemieux committed Nov 27, 2023
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  12. More comments

    @mathieulemieux
    mathieulemieux committed Nov 27, 2023
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  13. Refactoring delins handling in match_pos_var

    @mathieulemieux
    mathieulemieux committed Nov 27, 2023
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  14. Refactoring PV matching in match_pos_var

    @mathieulemieux
    mathieulemieux committed Nov 27, 2023
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  15. Refactor category_variant_extension()

    @mathieulemieux
    mathieulemieux committed Nov 27, 2023
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Commits on Jan 24, 2024

  1. Multiple stuff - need to be sorted later

    @mathieulemieux
    mathieulemieux committed Jan 24, 2024
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  2. deleting script files not to be commited

    @mathieulemieux
    mathieulemieux committed Jan 24, 2024
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