Releases: bcgsc/pori_ipr_client
v6.18.0
IPR Client v6.18.0 Release Notes
Bugfixes
[DEVSU-1939] - primarySite kIQR in IPR small mutation section
Tasks
[DEVSU-1902] - create project summary view and allow non-admins to view it
[DEVSU-1926] - Comments field in rapid report
[DEVSU-1927] - Rapid report VAF field as percentage
[DEVSU-1945] - Fix MSI variants display on Rapid Report tables
Improvements
[DEVSU-1932] - add tumour_type to patient info displayed for the rapid report
v6.17.0
IPR Client v6.17.0 Release Notes
Bugfixes
[DEVSU-1913] - Template image upload for front-end are broken
Features
[DEVSU-1908] - Template update - Alt / Total counts replacing Ref / Alt columns
[DEVSU-1909] - Add fields to germline reports for CGL results
Tasks
[DEVSU-1903] - add support for previously_reported field in ipr_client
[DEVSU-1920] - add 'Variants of Unknown Significance' table to rapid report display
Improvements
[DEVSU-1925] - change table names in rapid report and display tumour type
v6.16.0
IPR Client v6.16.0 Release Notes
Bugfixes
[DEVSU-1893] - Print view css formatting now consistent with what is shown on webpage, fixing page cutoff differences for all summaries
[DEVSU-1912] - separate rapid api calls to accomodate for when tmbur data is not available
Features
[DEVSU-1871] - Add response when creating a user on IPR
Improvements
[DEVSU-1894] - Rapid report - changes requested Nov 15-22
- Sort and filter Potential Clinical Association by IPR evidence level first (if A exists ignore B)
- Mutation burden field name to be consistent with the genomic report, use Genome TMB (mut/mb): 2.00 for example.
- Rename Initial Tumour Content into Pathology Tumour Content and use 'pathology tumour content' value
- Additional VAF column (Rapid report only, not for the genomic or TGR). The formula is VAF = Alt read counts/Total read counts.
v6.15.0
IPR Client v6.15.0 Release Notes
Bugfixes
[DEVSU-1854] - The diagnosis on the pdf TGR and PCPTGR reports has "( )" at the end of it
[DEVSU-1883] - Fix collapsible rows for online IPR report
New Features
[DEVSU-1828] - Collapse rows for same variant in PCP-TGR
[DEVSU-1833] - create rapid report template
[DEVSU-1869] - Convert signature removal on report edits to manual
[DEVSU-1873] - add display of field 'evidence level' to rapid and genomic reports
[DEVSU-1880] - Display microbial integration site in genomic report
Improvements
[DEVSU-1856] - remove deprecated msi fields from report templates where necessary
[DEVSU-1882] - update microbial species display
v6.14.1
IPR Client v6.14.1 Release Notes
Bugfixes
[DEVSU-1874] - Duplicated TMBUR data on report summary
v6.14.0
IPR Client v6.14.0 Release Notes
Bugfixes
[DEVSU-1859] - Unable to add specific variant in IPR therapeutic target table
[DEVSU-1861] - kIQR values in IPR CNV tables
[DEVSU-1835] - remove "sample" column from genomic kb matches
New Features
[DEVSU-1123] - default sort kb-matches by variant
[DEVSU-1751] - add TMBur fields to genomic report
[DEVSU-1829] - add ability to collapse rows in web and print version
[DEVSU-1847] - add report creator signature to genomic and germline report displays
Tasks
[DEVSU-1802] - Notation for SV in hg38 probing report
v6.13.1
IPR Client v6.13.1 Release Notes
Bug
[DEVSU-1848] - internal pancancer fields not loading in genomic report
v6.13.0
IPR Client v6.13.0 Release Notes
Bugfixes
[DEVSU-1837] - pathway analysis images sometimes get cut off in print version
[DEVSU-1814] - Remove somatic from PCP-TGR
New Features
[DEVSU-1112] - Add ability for managers to set report project
[DEVSU-1824] - use API calls from Germline>Pharmacogenomic section in KbMatch tables
v6.12.0
IPR Client v6.12.0 Release Notes
Bugfixes
[DEVSU-1693] - Ctrl-click link opens multiple tabs
[DEVSU-1825] - Synced toggle of tables
Tasks
[DEVSU-1630] - Added api autocomplete endpoint for gene names
[DEVSU-1779] - Added new subsection to display brca subtypes plot
Improvements
[DEVSU-1460] - Affected copies in the small mutations table
[DEVSU-1799] - added link option to editor or appendix text
[DEVSU-1817] - updated expression variant display column names and contents
[DEVSU-1820] - removed double lines at bottom of table in pcp-tgr