Merge pull request #144 from bcgsc/feature/DEVSU-2216-include-recruit… #291

	# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
	# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

	name: quick-tests

	on:
	- push

	jobs:
	build:

	runs-on: ubuntu-latest
	strategy:
	matrix:
	python-version: ['3.7', '3.8', '3.9', '3.10']

	steps:
	- uses: actions/checkout@v3
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v3
	with:
	python-version: ${{ matrix.python-version }}
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip setuptools
	pip install -e .[test] # coverage reports need -e to capture properly
	- name: Lint with flake8
	run: \|
	pip install flake8
	# stop the build if there are Python syntax errors or undefined names
	flake8 ipr --count --select=E9,F63,F7,F82 --show-source --statistics
	- name: Check with black
	run: \|
	pip install black
	black --check -S -l 100 ipr tests
	- name: Short Tests with pytest
	run: pytest --junitxml=junit/test-results-${{ matrix.python-version }}.xml --cov ipr --cov-report term --cov-report xml
	env:
	IPR_USER: ${{ secrets.IPR_TEST_USER }}
	IPR_PASS: ${{ secrets.IPR_TEST_PASSWORD }}
	EXCLUDE_INTEGRATION_TESTS: 1

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