tigmint-make tigmint error

[wjj666]

Hello, I run this command:
tigmint-make tigmint draft=/ontas_racon1_pilon1 reads=/10x

The error information is：
make: *** No rule to make target '/ontas_racon1_pilon1./10x.as0.65.nm5.molecule.size2000.trim0.window1000.span20.breaktigs.fa', needed by 'tigmint'. Stop.

Could you please tell me how to solve this problem? Thank you very much.

[lcoombe]

Hello @wjj666,

I'm assuming your reads are named 10x.fq.gz and the draft ontas_racon1_pilon1.fa?
If so, you need to take out those spare slashes that you have in the command, which sort of look like a file path:

tigmint-make tigmint draft=ontas_racon1_pilon1 reads=10x

Ensure that the draft and reads files are in the current working directory, and make soft-links to achieve that if neccessary.

Hope that helps - Thank you for your interest in Tigmint!
Lauren

[github-actions]

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