Initial commit for branch

.gitignore

@@ -1,19 +1,14 @@
-**/cache.sqlite
+# From https://github.com/unit9/boilerplate-python/blob/master/update_gitignore
 
+### Python ###
 # Byte-compiled / optimized / DLL files
 __pycache__/
-.pytest_cache
 *.py[cod]
 *$py.class
 
 # C extensions
 *.so
 
-# Compiled python modules
-*.pyc
-
-# Setuptools distribution folder.
-/dist/
 # Distribution / packaging
 .Python
 env/
@@ -28,35 +23,30 @@ lib64/
 parts/
 sdist/
 var/
-wheels/
 *.egg-info/
 .installed.cfg
 *.egg
-
-# PyCharm settings
-.idea
+**/.pytest_cache
 
 # PyInstaller
-# Usually these files are written by a python script from a template
-# before PyInstaller builds the exe, so as to inject date/other infos into it.
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
 *.manifest
 *.spec
 
 # Installer logs
 pip-log.txt
 pip-delete-this-directory.txt
 
-# Unit test / coverage reports / other tests
-belpy_test.py
+# Unit test / coverage reports
 htmlcov/
 .tox/
 .coverage
-coverage
 .coverage.*
 .cache
 nosetests.xml
 coverage.xml
-*.cover
+*,cover
 .hypothesis/
 
 # Translations
@@ -75,11 +65,7 @@ instance/
 .scrapy
 
 # Sphinx documentation
-doc/_build/
-doc/_static/
-doc/_templates/
-doc/Makefile
-doc/make.bat
+docs/_build/
 
 # PyBuilder
 target/
@@ -93,29 +79,88 @@ target/
 # celery beat schedule file
 celerybeat-schedule
 
-# SageMath parsed files
-*.sage.py
-
 # dotenv
 .env
 
 # virtualenv
-.venv
+.venv/
 venv/
 ENV/
-venv*
 
 # Spyder project settings
 .spyderproject
-.spyproject
 
 # Rope project settings
 .ropeproject
 
-# mkdocs documentation
-/site
 
-# mypy
-.mypy_cache/
-bel_lang/versions/*.json
-belbio_conf.yml
+### Linux ###
+*~
+
+# temporary files which can be created if a process still has a handle open of a deleted file
+.fuse_hidden*
+
+# KDE directory preferences
+.directory
+
+# Linux trash folder which might appear on any partition or disk
+.Trash-*
+
+# .nfs files are created when an open file is removed but is still being accessed
+.nfs*
+
+
+### OSX ###
+*.DS_Store
+.AppleDouble
+.LSOverride
+
+# Icon must end with two \r
+Icon
+# Thumbnails
+._*
+# Files that might appear in the root of a volume
+.DocumentRevisions-V100
+.fseventsd
+.Spotlight-V100
+.TemporaryItems
+.Trashes
+.VolumeIcon.icns
+.com.apple.timemachine.donotpresent
+# Directories potentially created on remote AFP share
+.AppleDB
+.AppleDesktop
+Network Trash Folder
+Temporary Items
+.apdisk
+
+
+### Windows ###
+# Windows image file caches
+Thumbs.db
+ehthumbs.db
+
+# Folder config file
+Desktop.ini
+
+# Recycle Bin used on file shares
+$RECYCLE.BIN/
+
+# Windows Installer files
+*.cab
+*.msi
+*.msm
+*.msp
+
+# Windows shortcuts
+*.lnk
+
+
+### Vagrant ###
+.vagrant/
+
+### Local rules, see .gitignore.tail to override! ###
+app/common
+cache.sqlite
+*.sqlite
+/coverage

.vscode/settings.json

@@ -2,6 +2,7 @@
     "peacock.color": "#81ec64",
     "workbench.colorCustomizations": {
         "activityBar.background": "#a6f291",
+        "activityBar.activeBorder": "#708cee",
         "activityBar.foreground": "#15202b",
         "activityBar.inactiveForeground": "#15202b99",
         "activityBarBadge.background": "#708cee",
@@ -14,7 +15,7 @@
         "statusBarItem.hoverBackground": "#5ce637",
         "statusBar.foreground": "#15202b"
     },
-    "python.pythonPath": "/Users/william/.virtualenvs/bel-wvk-0dh9/bin/python",
+    "python.pythonPath": "/Users/william/studio/dev/bel/.venv/bin/python3",
     "python.analysis.openFilesOnly": false,
     "python.analysis.memory.keepLibraryLocalVariables": true,
     "python.autoComplete.addBrackets": true,