@bioboxes

bioboxes

Standards for Interchangeable Bioinformatics Containers

  • 2 Updated Feb 17, 2017
  • Request for comments on interchangeable bioinformatics containers

    38 7 Updated Feb 17, 2017
  • Command line interface for running and verifying biobox images

    Cucumber 4 5 Updated Feb 13, 2017
  • LightAssembler genome assembler

    Shell 1 Updated Feb 11, 2017
  • Template for creating a biobox Docker image

    Updated Feb 11, 2017
  • Perl 1 Updated Feb 10, 2017
  • GATB minia pipeline biobox

    bioinformatics genome-assembly

    Shell Updated Feb 9, 2017
  • Shell Updated Feb 6, 2017
  • A minimal base image with biobox software installed

    Shell 1 Updated Feb 6, 2017
  • Shell Updated Feb 1, 2017
  • Python Updated Feb 1, 2017
  • Docker image for testing biobox tool interfaces

    Shell Updated Jan 19, 2017
  • Shell 1 Updated Dec 21, 2016
  • BBtools genome assembler

    Shell 2 Updated Sep 29, 2016
  • Docker container for abyss genome assembler

    Shell 1 1 Updated Sep 27, 2016
  • Shell 1 Updated Sep 23, 2016
  • Genome assembler pipeline using spades and fastq preprocessors

    Shell Updated Sep 23, 2016
  • Python library for creating and running bioboxes

    Python 2 2 Updated Sep 9, 2016
  • Docker container for sparse assembler

    Shell 1 Updated Sep 1, 2016
  • Shell Updated Aug 12, 2016
  • Shell 1 Updated Jul 27, 2016
  • The website for bioboxes

    JavaScript 5 6 Updated Jul 6, 2016
  • Shell Updated Jun 1, 2016
  • A simple bioboxes base image for Docker

    Shell 1 3 Updated Jan 8, 2016
  • Updated Nov 10, 2015
  • The identity function as a biobox

    Shell 1 Updated Nov 10, 2015
  • Validate that biobox.yaml files are correct.

    Cucumber 1 Updated Oct 27, 2015
  • Shell Updated Sep 3, 2015
  • Images for bioboxes.org

    Makefile Updated Aug 31, 2015
  • Commentary article for gigascience

    2 3 Updated Aug 18, 2015